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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs588861 chr1:4644207 G/A 0.000264 487 11.28 15.07 16.2 KM Plot
THCA rs5889227 chr8:8311066 A/AATAT 1.1E-10 467 15.9 14.92 12.97 KM Plot
THCA rs58952655 chr11:62612625 T/G 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs59015931 chr3:127633839 T/C 0 487 16.33 14.97 6.03 KM Plot
THCA rs59025774 chr2:240210525 A/G 0.000192 476 15.17 16.68 14.03 KM Plot
THCA rs59078007 chr1:91831180 A/T 7.89E-6 485 15.87 16.68 17.77 KM Plot
THCA rs59192211 chr19:43579282 G/T 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs59212357 chr2:28993975 A/G 9.58E-5 490 15.9 17.08 14.98 KM Plot
THCA rs59214233 chr1:119117991 C/T 3.64E-5 490 16.23 15.33 14.57 KM Plot
THCA rs59227799 chr14:24738379 T/C 1.23E-6 484 15.97 15.47 17.13 KM Plot
THCA rs59247475 chr3:139273724 C/CAGGGAGAGAGA 8.89E-6 480 15.97 16.05 14.27 KM Plot
THCA rs59280563 chr19:58230679 C/G 7.97E-5 482 15.32 16.18 15.13 KM Plot
THCA rs59458945 chr1:119122771 C/T 8.02E-7 488 16.07 15.9 14.57 KM Plot
THCA rs59509777 chr7:75875700 A/G 0.000115 486 16.22 16.62 11.77 KM Plot
THCA rs59547645 chr10:11828248 C/T 1.37E-13 484 16.23 14.8 23.67 KM Plot